Proposal for a unified classification system and nomenclature of lagoviruses.
Identifieur interne : 000537 ( Main/Exploration ); précédent : 000536; suivant : 000538Proposal for a unified classification system and nomenclature of lagoviruses.
Auteurs : Jacques Le Pendu [France] ; Joana Abrantes [Portugal] ; Stéphane Bertagnoli [France] ; Jean-Sébastien Guitton [France] ; Ghislaine Le Gall-Reculé [France] ; Ana Margarida Lopes [Portugal] ; Stéphane Marchandeau [France] ; Fernando Alda [États-Unis] ; Tereza Almeida [France] ; Alves Paulo Célio [États-Unis] ; Juan Bárcena [Espagne] ; Galina Burmakina [Russie] ; Esther Blanco [Espagne] ; Carlos Calvete [Espagne] ; Patrizia Cavadini [Italie] ; Brian Cooke [Australie] ; Kevin Dalton [Espagne] ; Miguel Delibes Mateos [Espagne] ; Wieslaw Deptula [Pologne] ; John Sebastian Eden [Australie] ; Fang Wang [République populaire de Chine] ; Catarina C. Ferreira [Allemagne] ; Paula Ferreira [Portugal] ; Pilar Foronda [Espagne] ; David Gonçalves [Portugal] ; Dolores Gavier-Widén [Suède] ; Robin Hall [Australie] ; Beata Hukowska-Szematowicz [Pologne] ; Peter Kerr [Australie] ; John Kovaliski [Australie] ; Antonio Lavazza [Italie] ; Jackie Mahar [Australie] ; Alexander Malogolovkin [Russie] ; Raquel M. Marques [Portugal] ; Sara Marques [Portugal] ; Aaron Martin-Alonso [Espagne] ; Pedro Monterroso [Portugal] ; Sacramento Moreno [Espagne] ; Greg Mutze [Australie] ; Aleksija Neimanis [Suède] ; Paulina Niedzwiedzka-Rystwej [Pologne] ; David Peacock [Australie] ; Francisco Parra [Espagne] ; Mara Rocchi [Royaume-Uni] ; Carlos Rouco [Espagne] ; Nathalie Ruvoën-Clouet [France] ; Eliane Silva [Portugal] ; Diogo Silvério [Portugal] ; Tanja Strive [Australie] ; Gertrudes Thompson [Portugal] ; Beata Tokarz-Deptula [Pologne] ; Pedro Esteves [Portugal]Source :
- The Journal of general virology [ 1465-2099 ] ; 2017.
Descripteurs français
- KwdFr :
- MESH :
- génétique : ARN viral, Lagovirus.
- pathogénicité : Lagovirus.
- virologie : Infections à Caliciviridae.
- Animaux, Génotype, Lagovirus, Lapins, Lepus, Phylogénie, Terminologie comme sujet.
English descriptors
- KwdEn :
- MESH :
- chemical , genetics : RNA, Viral.
- classification : Lagovirus.
- genetics : Lagovirus.
- pathogenicity : Lagovirus.
- virology : Caliciviridae Infections.
- Animals, Genotype, Hares, Phylogeny, Rabbits, Terminology as Topic.
Abstract
Lagoviruses belong to the Caliciviridae family. They were first recognized as highly pathogenic viruses of the European rabbit (Oryctolagus cuniculus) and European brown hare (Lepus europaeus) that emerged in the 1970-1980s, namely, rabbit haemorrhagic disease virus (RHDV) and European brown hare syndrome virus (EBHSV), according to the host species from which they had been first detected. However, the diversity of lagoviruses has recently expanded to include new related viruses with varying pathogenicity, geographic distribution and host ranges. Together with the frequent recombination observed amongst circulating viruses, there is a clear need to establish precise guidelines for classifying and naming lagovirus strains. Therefore, here we propose a new nomenclature based on phylogenetic relationships. In this new nomenclature, a single species of lagovirus would be recognized and called Lagovirus europaeus. The species would be divided into two genogroups that correspond to RHDV- and EBHSV-related viruses, respectively. Genogroups could be subdivided into genotypes, which could themselves be subdivided into phylogenetically well-supported variants. Based on available sequences, pairwise distance cutoffs have been defined, but with the accumulation of new sequences these cutoffs may need to be revised. We propose that an international working group could coordinate the nomenclature of lagoviruses and any proposals for revision.
DOI: 10.1099/jgv.0.000840
PubMed: 28714849
Affiliations:
- Allemagne, Australie, Espagne, France, Italie, Pologne, Portugal, Royaume-Uni, Russie, République populaire de Chine, Suède, États-Unis
- Communauté de Madrid, District de Leipzig, Midi-Pyrénées, Nouvelle-Galles du Sud, Occitanie (région administrative), Pays de la Loire, Saxe (Land)
- Angers, Leipzig, Madrid, Nantes, Sydney, Toulouse
- Université d'Angers, Université de Sydney
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Le document en format XML
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<author><name sortKey="Eden, John Sebastian" sort="Eden, John Sebastian" uniqKey="Eden J" first="John Sebastian" last="Eden">John Sebastian Eden</name>
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<author><name sortKey="Wang, Fang" sort="Wang, Fang" uniqKey="Wang F" first="Fang" last="Wang">Fang Wang</name>
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<author><name sortKey="Ferreira, Catarina C" sort="Ferreira, Catarina C" uniqKey="Ferreira C" first="Catarina C" last="Ferreira">Catarina C. Ferreira</name>
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<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>19Department of Biology, Trent University, Peterborough, Ontario, Canada 20Department of Conservation Biology, UFZ - Helmholtz Centre for Environmental Research, Leipzig</wicri:regionArea>
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<author><name sortKey="Ferreira, Paula" sort="Ferreira, Paula" uniqKey="Ferreira P" first="Paula" last="Ferreira">Paula Ferreira</name>
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<author><name sortKey="Gavier Widen, Dolores" sort="Gavier Widen, Dolores" uniqKey="Gavier Widen D" first="Dolores" last="Gavier-Widén">Dolores Gavier-Widén</name>
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<country xml:lang="fr">Suède</country>
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<author><name sortKey="Hall, Robin" sort="Hall, Robin" uniqKey="Hall R" first="Robin" last="Hall">Robin Hall</name>
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<author><name sortKey="Hukowska Szematowicz, Beata" sort="Hukowska Szematowicz, Beata" uniqKey="Hukowska Szematowicz B" first="Beata" last="Hukowska-Szematowicz">Beata Hukowska-Szematowicz</name>
<affiliation wicri:level="1"><nlm:affiliation>26Department of Immunology, University of Szczecin, Faculty of Biology, Z. Felczaka 3c, 71- 412 Szczecin, Poland.</nlm:affiliation>
<country xml:lang="fr">Pologne</country>
<wicri:regionArea>26Department of Immunology, University of Szczecin, Faculty of Biology, Z. Felczaka 3c, 71- 412 Szczecin</wicri:regionArea>
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<author><name sortKey="Kerr, Peter" sort="Kerr, Peter" uniqKey="Kerr P" first="Peter" last="Kerr">Peter Kerr</name>
<affiliation wicri:level="1"><nlm:affiliation>27Invasive Animals Cooperative Research Centre, University of Canberra, Bruce, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
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<country xml:lang="fr">Australie</country>
<wicri:regionArea>17Marie Bashir Institute for Infectious Diseases and Biosecurity, Charles Perkins Centre, School of Life and Environmental Sciences and Sydney Medical School, the University of Sydney, Sydney, Australia 27Invasive Animals Cooperative Research Centre, University of Canberra, Bruce</wicri:regionArea>
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<wicri:regionArea>21Department of Anatomy, ICBAS (Abel Salazar Institute for Biomedical Science) and UMIB (Unit for Multidisciplinary Biomedical Research), University of Porto</wicri:regionArea>
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<country xml:lang="fr">Suède</country>
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<author><name sortKey="Niedzwiedzka Rystwej, Paulina" sort="Niedzwiedzka Rystwej, Paulina" uniqKey="Niedzwiedzka Rystwej P" first="Paulina" last="Niedzwiedzka-Rystwej">Paulina Niedzwiedzka-Rystwej</name>
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<author><name sortKey="Parra, Francisco" sort="Parra, Francisco" uniqKey="Parra F" first="Francisco" last="Parra">Francisco Parra</name>
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<author><name sortKey="Rocchi, Mara" sort="Rocchi, Mara" uniqKey="Rocchi M" first="Mara" last="Rocchi">Mara Rocchi</name>
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<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>32Moredun Research Institute, Pentlands Science Park, Bush Loan, Penicuik, Midlothian EH26 0PZ</wicri:regionArea>
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<author><name sortKey="Rouco, Carlos" sort="Rouco, Carlos" uniqKey="Rouco C" first="Carlos" last="Rouco">Carlos Rouco</name>
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<author><name sortKey="Silverio, Diogo" sort="Silverio, Diogo" uniqKey="Silverio D" first="Diogo" last="Silvério">Diogo Silvério</name>
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<author><name sortKey="Strive, Tanja" sort="Strive, Tanja" uniqKey="Strive T" first="Tanja" last="Strive">Tanja Strive</name>
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<author><name sortKey="Thompson, Gertrudes" sort="Thompson, Gertrudes" uniqKey="Thompson G" first="Gertrudes" last="Thompson">Gertrudes Thompson</name>
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<author><name sortKey="Tokarz Deptula, Beata" sort="Tokarz Deptula, Beata" uniqKey="Tokarz Deptula B" first="Beata" last="Tokarz-Deptula">Beata Tokarz-Deptula</name>
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<sourceDesc><biblStruct><analytic><title xml:lang="en">Proposal for a unified classification system and nomenclature of lagoviruses.</title>
<author><name sortKey="Le Pendu, Jacques" sort="Le Pendu, Jacques" uniqKey="Le Pendu J" first="Jacques" last="Le Pendu">Jacques Le Pendu</name>
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<country xml:lang="fr">France</country>
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</author>
<author><name sortKey="Abrantes, Joana" sort="Abrantes, Joana" uniqKey="Abrantes J" first="Joana" last="Abrantes">Joana Abrantes</name>
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</affiliation>
</author>
<author><name sortKey="Bertagnoli, Stephane" sort="Bertagnoli, Stephane" uniqKey="Bertagnoli S" first="Stéphane" last="Bertagnoli">Stéphane Bertagnoli</name>
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<country xml:lang="fr">France</country>
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<author><name sortKey="Guitton, Jean Sebastien" sort="Guitton, Jean Sebastien" uniqKey="Guitton J" first="Jean-Sébastien" last="Guitton">Jean-Sébastien Guitton</name>
<affiliation wicri:level="3"><nlm:affiliation>4Department of Studies and Research, National Hunting and Wildlife Agency (ONCFS), Nantes, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
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<author><name sortKey="Le Gall Recule, Ghislaine" sort="Le Gall Recule, Ghislaine" uniqKey="Le Gall Recule G" first="Ghislaine" last="Le Gall-Reculé">Ghislaine Le Gall-Reculé</name>
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<author><name sortKey="Lopes, Ana Margarida" sort="Lopes, Ana Margarida" uniqKey="Lopes A" first="Ana Margarida" last="Lopes">Ana Margarida Lopes</name>
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<author><name sortKey="Marchandeau, Stephane" sort="Marchandeau, Stephane" uniqKey="Marchandeau S" first="Stéphane" last="Marchandeau">Stéphane Marchandeau</name>
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<author><name sortKey="Alda, Fernando" sort="Alda, Fernando" uniqKey="Alda F" first="Fernando" last="Alda">Fernando Alda</name>
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<country xml:lang="fr">États-Unis</country>
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<author><name sortKey="Almeida, Tereza" sort="Almeida, Tereza" uniqKey="Almeida T" first="Tereza" last="Almeida">Tereza Almeida</name>
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<country xml:lang="fr">France</country>
<wicri:regionArea>2CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Vairão, Portugal 4Department of Studies and Research, National Hunting and Wildlife Agency (ONCFS), Nantes</wicri:regionArea>
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<author><name sortKey="Celio, Alves Paulo" sort="Celio, Alves Paulo" uniqKey="Celio A" first="Alves Paulo" last="Célio">Alves Paulo Célio</name>
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<author><name sortKey="Barcena, Juan" sort="Barcena, Juan" uniqKey="Barcena J" first="Juan" last="Bárcena">Juan Bárcena</name>
<affiliation wicri:level="1"><nlm:affiliation>9Centro de Investigación en Sanidad Animal (INIA-CISA), Valdeolmos, 28130 Madrid, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>9Centro de Investigación en Sanidad Animal (INIA-CISA), Valdeolmos, 28130 Madrid</wicri:regionArea>
<placeName><settlement type="city">Madrid</settlement>
<region nuts="2" type="region">Communauté de Madrid</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Burmakina, Galina" sort="Burmakina, Galina" uniqKey="Burmakina G" first="Galina" last="Burmakina">Galina Burmakina</name>
<affiliation wicri:level="1"><nlm:affiliation>10National Research Institute of Veterinary Virology and Microbiology (VNIIVViM), Pokrov, Russia.</nlm:affiliation>
<country xml:lang="fr">Russie</country>
<wicri:regionArea>10National Research Institute of Veterinary Virology and Microbiology (VNIIVViM), Pokrov</wicri:regionArea>
<wicri:noRegion>Pokrov</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Blanco, Esther" sort="Blanco, Esther" uniqKey="Blanco E" first="Esther" last="Blanco">Esther Blanco</name>
<affiliation wicri:level="1"><nlm:affiliation>9Centro de Investigación en Sanidad Animal (INIA-CISA), Valdeolmos, 28130 Madrid, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>9Centro de Investigación en Sanidad Animal (INIA-CISA), Valdeolmos, 28130 Madrid</wicri:regionArea>
<placeName><settlement type="city">Madrid</settlement>
<region nuts="2" type="region">Communauté de Madrid</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Calvete, Carlos" sort="Calvete, Carlos" uniqKey="Calvete C" first="Carlos" last="Calvete">Carlos Calvete</name>
<affiliation wicri:level="1"><nlm:affiliation>11Animal Production and Health Department, Agrifood Research and Technology Centre of Aragon (CITA). Agrifood Institute of Aragon-IA2 (CITA-Zaragoza University), 50059 Zaragoza, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>11Animal Production and Health Department, Agrifood Research and Technology Centre of Aragon (CITA). Agrifood Institute of Aragon-IA2 (CITA-Zaragoza University), 50059 Zaragoza</wicri:regionArea>
<wicri:noRegion>50059 Zaragoza</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Cavadini, Patrizia" sort="Cavadini, Patrizia" uniqKey="Cavadini P" first="Patrizia" last="Cavadini">Patrizia Cavadini</name>
<affiliation wicri:level="1"><nlm:affiliation>12Proteomic and Virology Unit, Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna "Bruno Ubertini" (IZSLER), Via Antonio Bianchi 7/9, 25124 Brescia, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>12Proteomic and Virology Unit, Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna "Bruno Ubertini" (IZSLER), Via Antonio Bianchi 7/9, 25124 Brescia</wicri:regionArea>
<wicri:noRegion>25124 Brescia</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Cooke, Brian" sort="Cooke, Brian" uniqKey="Cooke B" first="Brian" last="Cooke">Brian Cooke</name>
<affiliation wicri:level="1"><nlm:affiliation>13Invasive Animals Cooperative Research Centre and Institute of Applied Ecology, University of Canberra, Canberra, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
<wicri:regionArea>13Invasive Animals Cooperative Research Centre and Institute of Applied Ecology, University of Canberra, Canberra</wicri:regionArea>
<wicri:noRegion>Canberra</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Dalton, Kevin" sort="Dalton, Kevin" uniqKey="Dalton K" first="Kevin" last="Dalton">Kevin Dalton</name>
<affiliation wicri:level="1"><nlm:affiliation>14Departamento de Bioquímica y Biología Molecular, Edificio Santiago Gascón, Instituto Universitario de Biotecnología de Asturias, Universidad de Oviedo, Asturias, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>14Departamento de Bioquímica y Biología Molecular, Edificio Santiago Gascón, Instituto Universitario de Biotecnología de Asturias, Universidad de Oviedo, Asturias</wicri:regionArea>
<wicri:noRegion>Asturias</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Delibes Mateos, Miguel" sort="Delibes Mateos, Miguel" uniqKey="Delibes Mateos M" first="Miguel" last="Delibes Mateos">Miguel Delibes Mateos</name>
<affiliation wicri:level="1"><nlm:affiliation>15Departamento de Biología Vegetal y Ecología, Facultad de Biología, Universidad de Sevilla, Apartado 1095, 41080 Sevilla, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>15Departamento de Biología Vegetal y Ecología, Facultad de Biología, Universidad de Sevilla, Apartado 1095, 41080 Sevilla</wicri:regionArea>
<wicri:noRegion>41080 Sevilla</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Deptula, Wieslaw" sort="Deptula, Wieslaw" uniqKey="Deptula W" first="Wieslaw" last="Deptula">Wieslaw Deptula</name>
<affiliation wicri:level="1"><nlm:affiliation>16Department of Microbiology, University of Szczecin, Faculty of Biology, Felczaka 3c,50 71-412 Szczecin, Poland.</nlm:affiliation>
<country xml:lang="fr">Pologne</country>
<wicri:regionArea>16Department of Microbiology, University of Szczecin, Faculty of Biology, Felczaka 3c,50 71-412 Szczecin</wicri:regionArea>
<wicri:noRegion>50 71-412 Szczecin</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Eden, John Sebastian" sort="Eden, John Sebastian" uniqKey="Eden J" first="John Sebastian" last="Eden">John Sebastian Eden</name>
<affiliation wicri:level="4"><nlm:affiliation>17Marie Bashir Institute for Infectious Diseases and Biosecurity, Charles Perkins Centre, School of Life and Environmental Sciences and Sydney Medical School, the University of Sydney, Sydney, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
<wicri:regionArea>17Marie Bashir Institute for Infectious Diseases and Biosecurity, Charles Perkins Centre, School of Life and Environmental Sciences and Sydney Medical School, the University of Sydney, Sydney</wicri:regionArea>
<placeName><settlement type="city">Sydney</settlement>
<region type="état">Nouvelle-Galles du Sud</region>
<settlement type="city">Sydney</settlement>
</placeName>
<orgName type="university">Université de Sydney</orgName>
</affiliation>
</author>
<author><name sortKey="Wang, Fang" sort="Wang, Fang" uniqKey="Wang F" first="Fang" last="Wang">Fang Wang</name>
<affiliation wicri:level="1"><nlm:affiliation>18Institute of Veterinary Medicine, Jiangsu Academy of Agricultural Sciences, Key Laboratory of Veterinary Biologicals Engineering and Technology, Ministry of Agriculture, National Center for Engineering Research of Veterinary Bio-products, Nanjing, PR China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>18Institute of Veterinary Medicine, Jiangsu Academy of Agricultural Sciences, Key Laboratory of Veterinary Biologicals Engineering and Technology, Ministry of Agriculture, National Center for Engineering Research of Veterinary Bio-products, Nanjing</wicri:regionArea>
<wicri:noRegion>Nanjing</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Ferreira, Catarina C" sort="Ferreira, Catarina C" uniqKey="Ferreira C" first="Catarina C" last="Ferreira">Catarina C. Ferreira</name>
<affiliation wicri:level="3"><nlm:affiliation>19Department of Biology, Trent University, Peterborough, Ontario, Canada 20Department of Conservation Biology, UFZ - Helmholtz Centre for Environmental Research, Leipzig, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>19Department of Biology, Trent University, Peterborough, Ontario, Canada 20Department of Conservation Biology, UFZ - Helmholtz Centre for Environmental Research, Leipzig</wicri:regionArea>
<placeName><region type="land" nuts="1">Saxe (Land)</region>
<region type="district" nuts="2">District de Leipzig</region>
<settlement type="city">Leipzig</settlement>
</placeName>
</affiliation>
</author>
<author><name sortKey="Ferreira, Paula" sort="Ferreira, Paula" uniqKey="Ferreira P" first="Paula" last="Ferreira">Paula Ferreira</name>
<affiliation wicri:level="1"><nlm:affiliation>21Department of Anatomy, ICBAS (Abel Salazar Institute for Biomedical Science) and UMIB (Unit for Multidisciplinary Biomedical Research), University of Porto, Portugal.</nlm:affiliation>
<country xml:lang="fr">Portugal</country>
<wicri:regionArea>21Department of Anatomy, ICBAS (Abel Salazar Institute for Biomedical Science) and UMIB (Unit for Multidisciplinary Biomedical Research), University of Porto</wicri:regionArea>
<wicri:noRegion>University of Porto</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Foronda, Pilar" sort="Foronda, Pilar" uniqKey="Foronda P" first="Pilar" last="Foronda">Pilar Foronda</name>
<affiliation wicri:level="1"><nlm:affiliation>22Department Obstetrics & Gynecology, Pediatrics, Preventive Medicine & Public Health, Toxicology, Forensic Medicine and Parasitology, University Institute of Tropical Diseases and Public Health of the Canary Islands. Universidad de La Laguna, Canary Islands, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>22Department Obstetrics & Gynecology, Pediatrics, Preventive Medicine & Public Health, Toxicology, Forensic Medicine and Parasitology, University Institute of Tropical Diseases and Public Health of the Canary Islands. Universidad de La Laguna, Canary Islands</wicri:regionArea>
<wicri:noRegion>Canary Islands</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Goncalves, David" sort="Goncalves, David" uniqKey="Goncalves D" first="David" last="Gonçalves">David Gonçalves</name>
<affiliation wicri:level="1"><nlm:affiliation>2CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Vairão, Portugal 7Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal.</nlm:affiliation>
<country xml:lang="fr">Portugal</country>
<wicri:regionArea>2CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Vairão, Portugal 7Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto</wicri:regionArea>
<wicri:noRegion>Porto</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Gavier Widen, Dolores" sort="Gavier Widen, Dolores" uniqKey="Gavier Widen D" first="Dolores" last="Gavier-Widén">Dolores Gavier-Widén</name>
<affiliation wicri:level="1"><nlm:affiliation>23Department of Pathology and Wildlife Diseases, National Veterinary Institute (SVA), Uppsala, Sweden 24Department of BiomedicalSciences and Veterinary Public Health, Swedish University of AgriculturalSciences, Uppsala, Sweden.</nlm:affiliation>
<country xml:lang="fr">Suède</country>
<wicri:regionArea>23Department of Pathology and Wildlife Diseases, National Veterinary Institute (SVA), Uppsala, Sweden 24Department of BiomedicalSciences and Veterinary Public Health, Swedish University of AgriculturalSciences, Uppsala</wicri:regionArea>
<wicri:noRegion>Uppsala</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Hall, Robin" sort="Hall, Robin" uniqKey="Hall R" first="Robin" last="Hall">Robin Hall</name>
<affiliation wicri:level="1"><nlm:affiliation>25CSIRO Health & Biosecurity, Canberra, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
<wicri:regionArea>25CSIRO Health & Biosecurity, Canberra</wicri:regionArea>
<wicri:noRegion>Canberra</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Hukowska Szematowicz, Beata" sort="Hukowska Szematowicz, Beata" uniqKey="Hukowska Szematowicz B" first="Beata" last="Hukowska-Szematowicz">Beata Hukowska-Szematowicz</name>
<affiliation wicri:level="1"><nlm:affiliation>26Department of Immunology, University of Szczecin, Faculty of Biology, Z. Felczaka 3c, 71- 412 Szczecin, Poland.</nlm:affiliation>
<country xml:lang="fr">Pologne</country>
<wicri:regionArea>26Department of Immunology, University of Szczecin, Faculty of Biology, Z. Felczaka 3c, 71- 412 Szczecin</wicri:regionArea>
<wicri:noRegion>71- 412 Szczecin</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Kerr, Peter" sort="Kerr, Peter" uniqKey="Kerr P" first="Peter" last="Kerr">Peter Kerr</name>
<affiliation wicri:level="1"><nlm:affiliation>27Invasive Animals Cooperative Research Centre, University of Canberra, Bruce, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
<wicri:regionArea>27Invasive Animals Cooperative Research Centre, University of Canberra, Bruce</wicri:regionArea>
<wicri:noRegion>Bruce</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Kovaliski, John" sort="Kovaliski, John" uniqKey="Kovaliski J" first="John" last="Kovaliski">John Kovaliski</name>
<affiliation wicri:level="1"><nlm:affiliation>28Primary Industries and Regions SA, Adelaide, SA, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
<wicri:regionArea>28Primary Industries and Regions SA, Adelaide, SA</wicri:regionArea>
<wicri:noRegion>SA</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Lavazza, Antonio" sort="Lavazza, Antonio" uniqKey="Lavazza A" first="Antonio" last="Lavazza">Antonio Lavazza</name>
<affiliation wicri:level="1"><nlm:affiliation>12Proteomic and Virology Unit, Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna "Bruno Ubertini" (IZSLER), Via Antonio Bianchi 7/9, 25124 Brescia, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>12Proteomic and Virology Unit, Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna "Bruno Ubertini" (IZSLER), Via Antonio Bianchi 7/9, 25124 Brescia</wicri:regionArea>
<wicri:noRegion>25124 Brescia</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Mahar, Jackie" sort="Mahar, Jackie" uniqKey="Mahar J" first="Jackie" last="Mahar">Jackie Mahar</name>
<affiliation wicri:level="4"><nlm:affiliation>17Marie Bashir Institute for Infectious Diseases and Biosecurity, Charles Perkins Centre, School of Life and Environmental Sciences and Sydney Medical School, the University of Sydney, Sydney, Australia 27Invasive Animals Cooperative Research Centre, University of Canberra, Bruce, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
<wicri:regionArea>17Marie Bashir Institute for Infectious Diseases and Biosecurity, Charles Perkins Centre, School of Life and Environmental Sciences and Sydney Medical School, the University of Sydney, Sydney, Australia 27Invasive Animals Cooperative Research Centre, University of Canberra, Bruce</wicri:regionArea>
<orgName type="university">Université de Sydney</orgName>
<placeName><settlement type="city">Sydney</settlement>
<region type="état">Nouvelle-Galles du Sud</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Malogolovkin, Alexander" sort="Malogolovkin, Alexander" uniqKey="Malogolovkin A" first="Alexander" last="Malogolovkin">Alexander Malogolovkin</name>
<affiliation wicri:level="1"><nlm:affiliation>10National Research Institute of Veterinary Virology and Microbiology (VNIIVViM), Pokrov, Russia.</nlm:affiliation>
<country xml:lang="fr">Russie</country>
<wicri:regionArea>10National Research Institute of Veterinary Virology and Microbiology (VNIIVViM), Pokrov</wicri:regionArea>
<wicri:noRegion>Pokrov</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Marques, Raquel M" sort="Marques, Raquel M" uniqKey="Marques R" first="Raquel M" last="Marques">Raquel M. Marques</name>
<affiliation wicri:level="1"><nlm:affiliation>21Department of Anatomy, ICBAS (Abel Salazar Institute for Biomedical Science) and UMIB (Unit for Multidisciplinary Biomedical Research), University of Porto, Portugal.</nlm:affiliation>
<country xml:lang="fr">Portugal</country>
<wicri:regionArea>21Department of Anatomy, ICBAS (Abel Salazar Institute for Biomedical Science) and UMIB (Unit for Multidisciplinary Biomedical Research), University of Porto</wicri:regionArea>
<wicri:noRegion>University of Porto</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Marques, Sara" sort="Marques, Sara" uniqKey="Marques S" first="Sara" last="Marques">Sara Marques</name>
<affiliation wicri:level="1"><nlm:affiliation>2CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Vairão, Portugal 29Departamento Clínicas Veterinárias - ICBAS, Instituto de Ciências Biomédicas de Abe Salazar, Universidade do Porto, Porto, Portugal.</nlm:affiliation>
<country xml:lang="fr">Portugal</country>
<wicri:regionArea>2CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Vairão, Portugal 29Departamento Clínicas Veterinárias - ICBAS, Instituto de Ciências Biomédicas de Abe Salazar, Universidade do Porto, Porto</wicri:regionArea>
<wicri:noRegion>Porto</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Martin Alonso, Aaron" sort="Martin Alonso, Aaron" uniqKey="Martin Alonso A" first="Aaron" last="Martin-Alonso">Aaron Martin-Alonso</name>
<affiliation wicri:level="1"><nlm:affiliation>22Department Obstetrics & Gynecology, Pediatrics, Preventive Medicine & Public Health, Toxicology, Forensic Medicine and Parasitology, University Institute of Tropical Diseases and Public Health of the Canary Islands. Universidad de La Laguna, Canary Islands, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>22Department Obstetrics & Gynecology, Pediatrics, Preventive Medicine & Public Health, Toxicology, Forensic Medicine and Parasitology, University Institute of Tropical Diseases and Public Health of the Canary Islands. Universidad de La Laguna, Canary Islands</wicri:regionArea>
<wicri:noRegion>Canary Islands</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Monterroso, Pedro" sort="Monterroso, Pedro" uniqKey="Monterroso P" first="Pedro" last="Monterroso">Pedro Monterroso</name>
<affiliation wicri:level="1"><nlm:affiliation>2CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Vairão, Portugal.</nlm:affiliation>
<country xml:lang="fr">Portugal</country>
<wicri:regionArea>2CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Vairão</wicri:regionArea>
<wicri:noRegion>Vairão</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Moreno, Sacramento" sort="Moreno, Sacramento" uniqKey="Moreno S" first="Sacramento" last="Moreno">Sacramento Moreno</name>
<affiliation wicri:level="1"><nlm:affiliation>30Ethology and Biodiversity Conservation Department, Doñana, Biological Station-CSIC, Américo Vespucio S/N, 41092 Seville, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>30Ethology and Biodiversity Conservation Department, Doñana, Biological Station-CSIC, Américo Vespucio S/N, 41092 Seville</wicri:regionArea>
<wicri:noRegion>41092 Seville</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Mutze, Greg" sort="Mutze, Greg" uniqKey="Mutze G" first="Greg" last="Mutze">Greg Mutze</name>
<affiliation wicri:level="1"><nlm:affiliation>28Primary Industries and Regions SA, Adelaide, SA, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
<wicri:regionArea>28Primary Industries and Regions SA, Adelaide, SA</wicri:regionArea>
<wicri:noRegion>SA</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Neimanis, Aleksija" sort="Neimanis, Aleksija" uniqKey="Neimanis A" first="Aleksija" last="Neimanis">Aleksija Neimanis</name>
<affiliation wicri:level="1"><nlm:affiliation>23Department of Pathology and Wildlife Diseases, National Veterinary Institute (SVA), Uppsala, Sweden 31Department of BiomedicalSciences and Veterinary Public Health, Swedish University of AgriculturalSciences, Uppsala, Sweden.</nlm:affiliation>
<country xml:lang="fr">Suède</country>
<wicri:regionArea>23Department of Pathology and Wildlife Diseases, National Veterinary Institute (SVA), Uppsala, Sweden 31Department of BiomedicalSciences and Veterinary Public Health, Swedish University of AgriculturalSciences, Uppsala</wicri:regionArea>
<wicri:noRegion>Uppsala</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Niedzwiedzka Rystwej, Paulina" sort="Niedzwiedzka Rystwej, Paulina" uniqKey="Niedzwiedzka Rystwej P" first="Paulina" last="Niedzwiedzka-Rystwej">Paulina Niedzwiedzka-Rystwej</name>
<affiliation wicri:level="1"><nlm:affiliation>26Department of Immunology, University of Szczecin, Faculty of Biology, Z. Felczaka 3c, 71- 412 Szczecin, Poland.</nlm:affiliation>
<country xml:lang="fr">Pologne</country>
<wicri:regionArea>26Department of Immunology, University of Szczecin, Faculty of Biology, Z. Felczaka 3c, 71- 412 Szczecin</wicri:regionArea>
<wicri:noRegion>71- 412 Szczecin</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Peacock, David" sort="Peacock, David" uniqKey="Peacock D" first="David" last="Peacock">David Peacock</name>
<affiliation wicri:level="1"><nlm:affiliation>28Primary Industries and Regions SA, Adelaide, SA, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
<wicri:regionArea>28Primary Industries and Regions SA, Adelaide, SA</wicri:regionArea>
<wicri:noRegion>SA</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Parra, Francisco" sort="Parra, Francisco" uniqKey="Parra F" first="Francisco" last="Parra">Francisco Parra</name>
<affiliation wicri:level="1"><nlm:affiliation>14Departamento de Bioquímica y Biología Molecular, Edificio Santiago Gascón, Instituto Universitario de Biotecnología de Asturias, Universidad de Oviedo, Asturias, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>14Departamento de Bioquímica y Biología Molecular, Edificio Santiago Gascón, Instituto Universitario de Biotecnología de Asturias, Universidad de Oviedo, Asturias</wicri:regionArea>
<wicri:noRegion>Asturias</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Rocchi, Mara" sort="Rocchi, Mara" uniqKey="Rocchi M" first="Mara" last="Rocchi">Mara Rocchi</name>
<affiliation wicri:level="1"><nlm:affiliation>32Moredun Research Institute, Pentlands Science Park, Bush Loan, Penicuik, Midlothian EH26 0PZ, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>32Moredun Research Institute, Pentlands Science Park, Bush Loan, Penicuik, Midlothian EH26 0PZ</wicri:regionArea>
<wicri:noRegion>Midlothian EH26 0PZ</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Rouco, Carlos" sort="Rouco, Carlos" uniqKey="Rouco C" first="Carlos" last="Rouco">Carlos Rouco</name>
<affiliation wicri:level="1"><nlm:affiliation>33Departamento de Zoología, Campus de Rabanales, Universidad de Córdoba, 14071 Córdoba, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>33Departamento de Zoología, Campus de Rabanales, Universidad de Córdoba, 14071 Córdoba</wicri:regionArea>
<wicri:noRegion>14071 Córdoba</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Ruvoen Clouet, Nathalie" sort="Ruvoen Clouet, Nathalie" uniqKey="Ruvoen Clouet N" first="Nathalie" last="Ruvoën-Clouet">Nathalie Ruvoën-Clouet</name>
<affiliation wicri:level="4"><nlm:affiliation>1CRCINA, Inserm, Université d'Angers, Université de Nantes, Nantes, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
<wicri:regionArea>1CRCINA, Inserm, Université d'Angers, Université de Nantes, Nantes</wicri:regionArea>
<placeName><region type="region">Pays de la Loire</region>
<region type="old region">Pays de la Loire</region>
<settlement type="city">Nantes</settlement>
<settlement type="city">Angers</settlement>
</placeName>
<orgName type="university">Université d'Angers</orgName>
</affiliation>
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<author><name sortKey="Silva, Eliane" sort="Silva, Eliane" uniqKey="Silva E" first="Eliane" last="Silva">Eliane Silva</name>
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<author><name sortKey="Thompson, Gertrudes" sort="Thompson, Gertrudes" uniqKey="Thompson G" first="Gertrudes" last="Thompson">Gertrudes Thompson</name>
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<country xml:lang="fr">Pologne</country>
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<author><name sortKey="Esteves, Pedro" sort="Esteves, Pedro" uniqKey="Esteves P" first="Pedro" last="Esteves">Pedro Esteves</name>
<affiliation wicri:level="1"><nlm:affiliation>2CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Vairão, Portugal 7Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal 34Instituto de Investigação e Formação Avançada em Ciências e Tecnologias da Saúde (CESPU), Gandra, Portugal.</nlm:affiliation>
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<series><title level="j">The Journal of general virology</title>
<idno type="eISSN">1465-2099</idno>
<imprint><date when="2017" type="published">2017</date>
</imprint>
</series>
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<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term>
<term>Caliciviridae Infections (virology)</term>
<term>Genotype</term>
<term>Hares</term>
<term>Lagovirus (classification)</term>
<term>Lagovirus (genetics)</term>
<term>Lagovirus (pathogenicity)</term>
<term>Phylogeny</term>
<term>RNA, Viral (genetics)</term>
<term>Rabbits</term>
<term>Terminology as Topic</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>ARN viral (génétique)</term>
<term>Animaux</term>
<term>Génotype</term>
<term>Infections à Caliciviridae (virologie)</term>
<term>Lagovirus ()</term>
<term>Lagovirus (génétique)</term>
<term>Lagovirus (pathogénicité)</term>
<term>Lapins</term>
<term>Lepus</term>
<term>Phylogénie</term>
<term>Terminologie comme sujet</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>RNA, Viral</term>
</keywords>
<keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Lagovirus</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Lagovirus</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ARN viral</term>
<term>Lagovirus</term>
</keywords>
<keywords scheme="MESH" qualifier="pathogenicity" xml:lang="en"><term>Lagovirus</term>
</keywords>
<keywords scheme="MESH" qualifier="pathogénicité" xml:lang="fr"><term>Lagovirus</term>
</keywords>
<keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Infections à Caliciviridae</term>
</keywords>
<keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Caliciviridae Infections</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Animals</term>
<term>Genotype</term>
<term>Hares</term>
<term>Phylogeny</term>
<term>Rabbits</term>
<term>Terminology as Topic</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Animaux</term>
<term>Génotype</term>
<term>Lagovirus</term>
<term>Lapins</term>
<term>Lepus</term>
<term>Phylogénie</term>
<term>Terminologie comme sujet</term>
</keywords>
</textClass>
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<front><div type="abstract" xml:lang="en">Lagoviruses belong to the Caliciviridae family. They were first recognized as highly pathogenic viruses of the European rabbit (Oryctolagus cuniculus) and European brown hare (Lepus europaeus) that emerged in the 1970-1980s, namely, rabbit haemorrhagic disease virus (RHDV) and European brown hare syndrome virus (EBHSV), according to the host species from which they had been first detected. However, the diversity of lagoviruses has recently expanded to include new related viruses with varying pathogenicity, geographic distribution and host ranges. Together with the frequent recombination observed amongst circulating viruses, there is a clear need to establish precise guidelines for classifying and naming lagovirus strains. Therefore, here we propose a new nomenclature based on phylogenetic relationships. In this new nomenclature, a single species of lagovirus would be recognized and called Lagovirus europaeus. The species would be divided into two genogroups that correspond to RHDV- and EBHSV-related viruses, respectively. Genogroups could be subdivided into genotypes, which could themselves be subdivided into phylogenetically well-supported variants. Based on available sequences, pairwise distance cutoffs have been defined, but with the accumulation of new sequences these cutoffs may need to be revised. We propose that an international working group could coordinate the nomenclature of lagoviruses and any proposals for revision.</div>
</front>
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